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Stock Comparison

PRTA vs IONS vs ALNY vs FOLD vs RARE

Revenue, margins, valuation, and 5-year total return — side by side.

Live fundamentals10-year financials5-year price chart
PRTA
Prothena Corporation plc

Biotechnology

HealthcareNASDAQ • IE
Market Cap$567M
5Y Perf.-1.2%
IONS
Ionis Pharmaceuticals, Inc.

Biotechnology

HealthcareNASDAQ • US
Market Cap$12.56B
5Y Perf.+35.2%
ALNY
Alnylam Pharmaceuticals, Inc.

Biotechnology

HealthcareNASDAQ • US
Market Cap$39.48B
5Y Perf.+118.8%
FOLD
Amicus Therapeutics, Inc.

Biotechnology

HealthcareNASDAQ • US
Market Cap$4.55B
5Y Perf.+15.9%
RARE
Ultragenyx Pharmaceutical Inc.

Biotechnology

HealthcareNASDAQ • US
Market Cap$2.57B
5Y Perf.-61.8%

PRTA vs IONS vs ALNY vs FOLD vs RARE — Key Financials

Market cap, revenue, margins, and valuation side-by-side.

Company Snapshot
PRTA logoPRTA
IONS logoIONS
ALNY logoALNY
FOLD logoFOLD
RARE logoRARE
IndustryBiotechnologyBiotechnologyBiotechnologyBiotechnologyBiotechnology
Market Cap$567M$12.56B$39.48B$4.55B$2.57B
Revenue (TTM)$58M$1.06B$4.29B$634M$669M
Net Income (TTM)$-151M$-327M$577M$-27M$-609M
Gross Margin-39.7%98.3%80.9%87.9%83.6%
Operating Margin-210.6%-33.3%17.5%5.2%-83.9%
Forward P/E42.7x44.2x40.6x
Total Debt$14M$2.61B$1.28B$483M$1.28B
Cash & Equiv.$308M$372M$1.66B$214M$434M

PRTA vs IONS vs ALNY vs FOLD vs RARELong-Term Stock Performance

Price return indexed to 100 at period start. Dividends excluded.

PRTA
IONS
ALNY
FOLD
RARE
StockMay 20May 26Return
Prothena Corporatio… (PRTA)10098.8-1.2%
Ionis Pharmaceutica… (IONS)100135.2+35.2%
Alnylam Pharmaceuti… (ALNY)100218.8+118.8%
Amicus Therapeutics… (FOLD)100115.9+15.9%
Ultragenyx Pharmace… (RARE)10038.2-61.8%

Price return only. Dividends and distributions are not included.

Quick Verdict: PRTA vs IONS vs ALNY vs FOLD vs RARE

Each card shows where this stock fits in a portfolio — not just who wins on paper.

Bottom line: ALNY leads in 3 of 7 categories (5-stock set), making it the strongest pick for growth and revenue expansion and profitability and margin quality. Amicus Therapeutics, Inc. is the stronger pick specifically for valuation and capital efficiency and recent price momentum and sentiment. IONS also leads in specific categories worth noting. As sector peers, any of these can serve as alternatives in the same allocation.
PRTA
Prothena Corporation plc
The Healthcare Pick

PRTA lags the leaders in this set but could rank higher in a more targeted comparison.

Best for: healthcare exposure
IONS
Ionis Pharmaceuticals, Inc.
The Income Pick

IONS ranks third and is worth considering specifically for income & stability and sleep-well-at-night.

  • beta 0.55
  • Lower volatility, beta 0.55, current ratio 3.83x
  • Beta 0.55, current ratio 3.83x
  • Beta 0.55 vs RARE's 1.42
Best for: income & stability and sleep-well-at-night
ALNY
Alnylam Pharmaceuticals, Inc.
The Growth Play

ALNY carries the broadest edge in this set and is the clearest fit for growth exposure and long-term compounding.

  • Rev growth 65.2%, EPS growth 206.9%, 3Y rev CAGR 53.0%
  • 411.9% 10Y total return vs IONS's 121.1%
  • 65.2% revenue growth vs PRTA's -92.8%
  • 13.5% margin vs PRTA's -260.9%
Best for: growth exposure and long-term compounding
FOLD
Amicus Therapeutics, Inc.
The Value Play

FOLD is the #2 pick in this set and the best alternative if value and momentum is your priority.

  • Better valuation composite
  • +137.9% vs RARE's -21.8%
Best for: value and momentum
RARE
Ultragenyx Pharmaceutical Inc.
The Growth Angle

Among these 5 stocks, RARE doesn't own a clear edge in any measured category.

Best for: healthcare exposure
See the full category breakdown
CategoryWinnerWhy
GrowthALNY logoALNY65.2% revenue growth vs PRTA's -92.8%
ValueFOLD logoFOLDBetter valuation composite
Quality / MarginsALNY logoALNY13.5% margin vs PRTA's -260.9%
Stability / SafetyIONS logoIONSBeta 0.55 vs RARE's 1.42
DividendsTieNone of these 5 stocks pay a meaningful dividend
Momentum (1Y)FOLD logoFOLD+137.9% vs RARE's -21.8%
Efficiency (ROA)ALNY logoALNY11.8% ROA vs RARE's -45.8%, ROIC 33.4% vs -89.4%

PRTA vs IONS vs ALNY vs FOLD vs RARE — Revenue Breakdown by Segment

How each company's revenue is distributed across its business units

PRTAProthena Corporation plc
FY 2025
Collaboration
99.5%$10M
License
0.5%$50,000
IONSIonis Pharmaceuticals, Inc.
FY 2025
Commercial Member
52.1%$436M
Royalty
34.1%$286M
Product
13.8%$115M
ALNYAlnylam Pharmaceuticals, Inc.
FY 2025
GIVLAARI
64.1%$308M
ONPATTRO
35.9%$173M
FOLDAmicus Therapeutics, Inc.

Segment breakdown not available.

RAREUltragenyx Pharmaceutical Inc.
FY 2025
Product
54.8%$369M
Royalty
45.2%$304M

PRTA vs IONS vs ALNY vs FOLD vs RARE — Financial Metrics

Side-by-side numbers across 5 stocks — who leads on profitability, valuation, growth, and risk.

BEST OVERALLALNYLAGGINGRARE

Who Leads Where

ALNY leads in 2 of 6 categories

PRTA leads 0 • IONS leads 0 • FOLD leads 0 • RARE leads 0 • 3 tied

Explore the data ↓
RAREUltragenyx Pharmaceut…
0leads
FOLDAmicus Therapeutics, …
0leads
IONSIonis Pharmaceuticals…
0leads
PRTAProthena Corporation …
0leads
ALNYAlnylam Pharmaceutica…
2leads
6 Total Categories

Income & Cash Flow (Last 12 Months)

ALNY leads this category, winning 4 of 6 comparable metrics.

ALNY is the larger business by revenue, generating $4.3B annually — 74.0x PRTA's $58M. ALNY is the more profitable business, keeping 13.5% of every revenue dollar as net income compared to PRTA's -2.6%. On growth, PRTA holds the edge at +17.1% YoY revenue growth, suggesting stronger near-term business momentum.

MetricPRTA logoPRTAProthena Corporat…IONS logoIONSIonis Pharmaceuti…ALNY logoALNYAlnylam Pharmaceu…FOLD logoFOLDAmicus Therapeuti…RARE logoRAREUltragenyx Pharma…
RevenueTrailing 12 months$58M$1.1B$4.3B$634M$669M
EBITDAEarnings before interest/tax-$121M$4.5B$677M$40M-$536M
Net IncomeAfter-tax profit-$151M-$327M$577M-$27M-$609M
Free Cash FlowCash after capex-$85M-$971M$641M$30M-$487M
Gross MarginGross profit ÷ Revenue-39.7%+98.3%+80.9%+87.9%+83.6%
Operating MarginEBIT ÷ Revenue-2.1%-33.3%+17.5%+5.2%-83.9%
Net MarginNet income ÷ Revenue-2.6%-30.9%+13.5%-4.3%-91.0%
FCF MarginFCF ÷ Revenue-147.2%-91.8%+15.0%+4.7%-72.8%
Rev. Growth (YoY)Latest quarter vs prior year+17.1%+87.0%+96.4%+23.7%-2.4%
EPS Growth (YoY)Latest quarter vs prior year+153.6%+39.8%+4.4%-89.0%-17.2%
ALNY leads this category, winning 4 of 6 comparable metrics.

Valuation Metrics

Evenly matched — ALNY and FOLD each lead in 2 of 6 comparable metrics.

On an enterprise value basis, ALNY's 70.2x EV/EBITDA is more attractive than FOLD's 114.9x.

MetricPRTA logoPRTAProthena Corporat…IONS logoIONSIonis Pharmaceuti…ALNY logoALNYAlnylam Pharmaceu…FOLD logoFOLDAmicus Therapeuti…RARE logoRAREUltragenyx Pharma…
Market CapShares × price$567M$12.6B$39.5B$4.5B$2.6B
Enterprise ValueMkt cap + debt − cash$273M$14.8B$39.1B$4.8B$3.4B
Trailing P/EPrice ÷ TTM EPS-2.32x-31.94x127.00x-164.85x-4.48x
Forward P/EPrice ÷ next-FY EPS est.42.68x44.18x40.62x
PEG RatioP/E ÷ EPS growth rate
EV / EBITDAEnterprise value multiple70.17x114.88x
Price / SalesMarket cap ÷ Revenue58.54x13.31x10.63x7.17x3.82x
Price / BookPrice ÷ Book value/share2.02x24.87x50.50x16.29x
Price / FCFMarket cap ÷ FCF84.84x152.43x
Evenly matched — ALNY and FOLD each lead in 2 of 6 comparable metrics.

Profitability & Efficiency

ALNY leads this category, winning 7 of 9 comparable metrics.

ALNY delivers a 98.3% return on equity — every $100 of shareholder capital generates $98 in annual profit, vs $-6 for RARE. PRTA carries lower financial leverage with a 0.05x debt-to-equity ratio, signaling a more conservative balance sheet compared to IONS's 5.35x. On the Piotroski fundamental quality scale (0–9), ALNY scores 6/9 vs PRTA's 1/9, reflecting solid financial health.

MetricPRTA logoPRTAProthena Corporat…IONS logoIONSIonis Pharmaceuti…ALNY logoALNYAlnylam Pharmaceu…FOLD logoFOLDAmicus Therapeuti…RARE logoRAREUltragenyx Pharma…
ROE (TTM)Return on equity-49.9%-58.6%+98.3%-12.0%-6.1%
ROA (TTM)Return on assets-42.3%-10.1%+11.8%-3.2%-45.8%
ROICReturn on invested capital-21.0%-12.8%+33.4%+5.3%-89.4%
ROCEReturn on capital employed-47.0%-14.1%+15.3%+5.1%-46.4%
Piotroski ScoreFundamental quality 0–913644
Debt / EquityFinancial leverage0.05x5.35x1.62x1.76x
Net DebtTotal debt minus cash-$294M$2.2B-$379M$269M$842M
Cash & Equiv.Liquid assets$308M$372M$1.7B$214M$434M
Total DebtShort + long-term debt$14M$2.6B$1.3B$483M$1.3B
Interest CoverageEBIT ÷ Interest expense-3.64x2.02x1.00x-14.49x
ALNY leads this category, winning 7 of 9 comparable metrics.

Total Returns (Dividends Reinvested)

Evenly matched — IONS and ALNY each lead in 2 of 6 comparable metrics.

A $10,000 investment in ALNY five years ago would be worth $22,537 today (with dividends reinvested), compared to $2,281 for RARE. Over the past 12 months, FOLD leads with a +137.9% total return vs RARE's -21.8%. The 3-year compound annual growth rate (CAGR) favors IONS at 29.3% vs PRTA's -48.5% — a key indicator of consistent wealth creation.

MetricPRTA logoPRTAProthena Corporat…IONS logoIONSIonis Pharmaceuti…ALNY logoALNYAlnylam Pharmaceu…FOLD logoFOLDAmicus Therapeuti…RARE logoRAREUltragenyx Pharma…
YTD ReturnYear-to-date+14.5%-4.6%-26.1%+1.5%+10.7%
1-Year ReturnPast 12 months+44.4%+129.9%+7.0%+137.9%-21.8%
3-Year ReturnCumulative with dividends-86.3%+116.1%+40.9%+19.0%-44.5%
5-Year ReturnCumulative with dividends-57.2%+108.0%+125.4%+48.6%-77.2%
10-Year ReturnCumulative with dividends-73.0%+121.1%+411.9%+119.2%-59.4%
CAGR (3Y)Annualised 3-year return-48.5%+29.3%+12.1%+6.0%-17.8%
Evenly matched — IONS and ALNY each lead in 2 of 6 comparable metrics.

Risk & Volatility

Evenly matched — IONS and FOLD each lead in 1 of 2 comparable metrics.

IONS is the less volatile stock with a 0.55 beta — it tends to amplify market swings less than RARE's 1.42 beta. A beta below 1.0 means the stock typically moves less than the S&P 500. FOLD currently trades 99.9% from its 52-week high vs ALNY's 59.7% drawdown — a narrower gap to the peak suggests stronger recent price momentum.

MetricPRTA logoPRTAProthena Corporat…IONS logoIONSIonis Pharmaceuti…ALNY logoALNYAlnylam Pharmaceu…FOLD logoFOLDAmicus Therapeuti…RARE logoRAREUltragenyx Pharma…
Beta (5Y)Sensitivity to S&P 5000.96x0.55x0.71x0.63x1.42x
52-Week HighHighest price in past year$11.69$86.74$495.55$14.50$42.37
52-Week LowLowest price in past year$4.32$31.66$245.96$5.51$18.29
% of 52W HighCurrent price vs 52-week peak+90.1%+87.6%+59.7%+99.9%+61.7%
RSI (14)Momentum oscillator 0–10060.358.843.872.266.6
Avg Volume (50D)Average daily shares traded474K2.0M1.1M3.0M1.8M
Evenly matched — IONS and FOLD each lead in 1 of 2 comparable metrics.

Analyst Outlook

Insufficient data to determine a leader in this category.

Analyst consensus: PRTA as "Buy", IONS as "Buy", ALNY as "Buy", FOLD as "Buy", RARE as "Buy". Consensus price targets imply 97.1% upside for RARE (target: $52) vs 0.1% for FOLD (target: $15).

MetricPRTA logoPRTAProthena Corporat…IONS logoIONSIonis Pharmaceuti…ALNY logoALNYAlnylam Pharmaceu…FOLD logoFOLDAmicus Therapeuti…RARE logoRAREUltragenyx Pharma…
Analyst RatingConsensus buy/hold/sellBuyBuyBuyBuyBuy
Price TargetConsensus 12-month target$19.00$107.27$445.67$14.50$51.50
# AnalystsCovering analysts2832522433
Dividend YieldAnnual dividend ÷ price
Dividend StreakConsecutive years of raises1
Dividend / ShareAnnual DPS
Buyback YieldShare repurchases ÷ mkt cap0.0%0.0%0.0%0.0%0.0%
Insufficient data to determine a leader in this category.
Key Takeaway

ALNY leads in 2 of 6 categories — strongest in Income & Cash Flow and Profitability & Efficiency. 3 categories are tied.

Best OverallAlnylam Pharmaceuticals, In… (ALNY)Leads 2 of 6 categories
Loading custom metrics...

PRTA vs IONS vs ALNY vs FOLD vs RARE: Key Questions Answered

10 questions · data-driven answers · updated daily

01

Is PRTA or IONS or ALNY or FOLD or RARE a better buy right now?

For growth investors, Alnylam Pharmaceuticals, Inc.

(ALNY) is the stronger pick with 65. 2% revenue growth year-over-year, versus -92. 8% for Prothena Corporation plc (PRTA). Alnylam Pharmaceuticals, Inc. (ALNY) offers the better valuation at 127. 0x trailing P/E (44. 2x forward), making it the more compelling value choice. Analysts rate Prothena Corporation plc (PRTA) a "Buy" — based on 28 analyst ratings — the highest consensus in this comparison. The "better buy" depends entirely on your goals: growth investors should weight revenue trajectory, value investors should weight P/E and PEG, and income investors should weight dividend yield and streak.

02

Which has the better valuation — PRTA or IONS or ALNY or FOLD or RARE?

On forward P/E, Amicus Therapeutics, Inc.

is actually cheaper at 40. 6x — notably different from the trailing picture, reflecting expected earnings growth.

03

Which is the better long-term investment — PRTA or IONS or ALNY or FOLD or RARE?

Over the past 5 years, Alnylam Pharmaceuticals, Inc.

(ALNY) delivered a total return of +125. 4%, compared to -77. 2% for Ultragenyx Pharmaceutical Inc. (RARE). Over 10 years, the gap is even starker: ALNY returned +411. 9% versus PRTA's -73. 0%. Past returns do not guarantee future results, and the stock with the higher historical return may already have its best growth priced in.

04

Which is safer — PRTA or IONS or ALNY or FOLD or RARE?

By beta (market sensitivity over 5 years), Ionis Pharmaceuticals, Inc.

(IONS) is the lower-risk stock at 0. 55β versus Ultragenyx Pharmaceutical Inc. 's 1. 42β — meaning RARE is approximately 160% more volatile than IONS relative to the S&P 500. On balance sheet safety, Prothena Corporation plc (PRTA) carries a lower debt/equity ratio of 5% versus 5% for Ionis Pharmaceuticals, Inc. — giving it more financial flexibility in a downturn.

05

Which is growing faster — PRTA or IONS or ALNY or FOLD or RARE?

By revenue growth (latest reported year), Alnylam Pharmaceuticals, Inc.

(ALNY) is pulling ahead at 65. 2% versus -92. 8% for Prothena Corporation plc (PRTA). On earnings-per-share growth, the picture is similar: Alnylam Pharmaceuticals, Inc. grew EPS 206. 9% year-over-year, compared to -99. 6% for Prothena Corporation plc. Over a 3-year CAGR, ALNY leads at 53. 0% annualised revenue growth. Higher growth typically commands a higher valuation multiple — check whether the premium P/E or P/S is justified by the growth rate using the PEG ratio.

06

Which has better profit margins — PRTA or IONS or ALNY or FOLD or RARE?

Alnylam Pharmaceuticals, Inc.

(ALNY) is the more profitable company, earning 8. 4% net margin versus -25. 2% for Prothena Corporation plc — meaning it keeps 8. 4% of every revenue dollar as bottom-line profit. Operating margin tells a similar story: ALNY leads at 13. 5% versus -1905. 8% for PRTA. At the gross margin level — before operating expenses — IONS leads at 98. 3%, reflecting greater pricing power or product mix advantage. Stronger margins indicate durable pricing power, lower cost of revenue, or higher mix of software/services. They are one of the clearest signs of business quality.

07

Is PRTA or IONS or ALNY or FOLD or RARE more undervalued right now?

On forward earnings alone, Amicus Therapeutics, Inc.

(FOLD) trades at 40. 6x forward P/E versus 44. 2x for Alnylam Pharmaceuticals, Inc. — 3. 6x cheaper on a one-year earnings basis. Analyst consensus price targets imply the most upside for RARE: 97. 1% to $51. 50.

08

Which pays a better dividend — PRTA or IONS or ALNY or FOLD or RARE?

None of the stocks in this comparison currently pay a material dividend.

All are effectively zero-yield and should be held for capital appreciation rather than income.

09

Is PRTA or IONS or ALNY or FOLD or RARE better for a retirement portfolio?

For long-horizon retirement investors, Alnylam Pharmaceuticals, Inc.

(ALNY) is the stronger choice — it scores higher on the combination of lower volatility, dividend reliability, and long-term compounding (low volatility (β 0. 71), +411. 9% 10Y return). Both have compounded well over 10 years (ALNY: +411. 9%, RARE: -59. 4%), confirming both are viable long-term holds — but the lower-volatility option typically results in less emotional selling during corrections. Retirement portfolios generally favour predictability over maximum returns. Consult a financial advisor before making allocation decisions.

10

What are the main differences between PRTA and IONS and ALNY and FOLD and RARE?

Both stocks operate in the Healthcare sector, making this a peer-level intra-sector comparison — the same macro tailwinds and headwinds will affect both.

In terms of investment character: PRTA is a small-cap quality compounder stock; IONS is a mid-cap high-growth stock; ALNY is a mid-cap high-growth stock; FOLD is a small-cap high-growth stock; RARE is a small-cap high-growth stock. These fundamental differences mean investors should not choose between them on a single metric — the "better stock" depends entirely on which of these characteristics aligns with your investment strategy.

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  • Market Cap > $100B
  • Revenue Growth > 43%
  • Gross Margin > 59%
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  • Sector: Healthcare
  • Market Cap > $100B
  • Revenue Growth > 48%
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RARE

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  • Sector: Healthcare
  • Market Cap > $100B
  • Gross Margin > 50%
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(PRTA: 1706.4% · IONS: 87.0%)

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